minionSummaryData

DOI: 10.18129/B9.bioc.minionSummaryData    

Summarised MinION sequencing data published by Ashton et al. 2015

Bioconductor version: Release (3.7)

Summarised MinION sequencing data for Salmonella Typhi published by Ashton et al. in 2015. Three replicate runs are each provided as Fast5Summary objects.

Author: Mike Smith [aut, cre]

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("minionSummaryData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("minionSummaryData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("minionSummaryData")

 

HTML R Script Creating example MinION summary dataset
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews ExperimentData, SequencingData
Version 1.10.0
License MIT + file LICENSE
Depends R (>= 3.2.0)
Imports
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me IONiseR
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package minionSummaryData_1.10.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/minionSummaryData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/minionSummaryData
Package Short Url http://bioconductor.org/packages/minionSummaryData/
Package Downloads Report Download Stats

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