To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("genomationData")

In most cases, you don't need to download the package archive at all.

genomationData

DOI: 10.18129/B9.bioc.genomationData    

Experimental data for showing functionalities of the genomation package

Bioconductor version: Release (3.5)

The package contains Chip Seq, Methylation and Cage data, downloaded from Encode

Author: Altuna Akalin, Vedran Franke

Maintainer: Vedran Franke <vedran.franke at gmail.com>

Citation (from within R, enter citation("genomationData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("genomationData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genomationData")

 

PDF R Script genomationData
PDF   Reference Manual

Details

biocViews ChIPSeqData, ChipOnChipData, ENCODE, ExperimentData, Genome, SequencingData, StemCell
Version 1.8.0
License GPL-3
Depends
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me genomation
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package genomationData_1.8.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/genomationData
Package Short Url http://bioconductor.org/packages/genomationData/
Package Downloads Report Download Stats

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