brgedata

DOI: 10.18129/B9.bioc.brgedata    

Exposures, Gene Expression and Methylation data for ilustration purpouses

Bioconductor version: Release (3.7)

This package contains several sets of omics data including Gene Expression (ExpressionSet), Methylation (GenomicRatioSet), Proteome and Exposome (ExposomeSet). This data is used in vignettes and exaples at MEAL, MultiDataSet and omicRexposome.

Author: Carlos Ruiz-Arenas [aut, cre], Carles Hernandez-Ferrer [aut], Juan R. Gonzalez [aut]

Maintainer: Carlos Ruiz-Arenas <carlos.ruiz at isglobal.org>

Citation (from within R, enter citation("brgedata")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("brgedata")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("brgedata")

 

HTML R Script brgedata -- data R package with three omic data-set and exposome data-set from the same Spanish pupulation
PDF   Reference Manual
Text   LICENSE

Details

biocViews ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version 1.2.0
License MIT + file LICENSE
Depends R (>= 3.4), Biobase
Imports SummarizedExperiment
LinkingTo
Suggests minfi, MultiAssayExperiment, knitr, rexposome
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me MEAL, MultiDataSet, omicRexposome
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package brgedata_1.2.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/brgedata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/brgedata
Package Short Url http://bioconductor.org/packages/brgedata/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: