brainImageRdata

DOI: 10.18129/B9.bioc.brainImageRdata    

Image masks and expression data for use with BrainImageR

Bioconductor version: Release (3.8)

brainImageRdata contains image masks for the developing human and the adult human brain. These masks can be used in conjunction with the gene expression data to generate spatial gene set enrichment plots. It also contains the expression data for the 15 pcw human brain, the adult human brain, and the developing human brain.

Author: Sara Linker

Maintainer: Sara Linker <slinker at salk.edu>

Citation (from within R, enter citation("brainImageRdata")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("brainImageRdata", version = "3.8")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("brainImageRdata")

 

HTML R Script brainImageRdata
PDF   Reference Manual

Details

biocViews ExperimentData, ExpressionData, Homo_sapiens_Data, OrganismData
Version 1.0.0
License CC BY-SA 4.0
Depends ExperimentHub
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package brainImageRdata_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/brainImageRdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/brainImageRdata
Package Short Url http://bioconductor.org/packages/brainImageRdata/
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