To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("TCGAWorkflowData")

In most cases, you don't need to download the package archive at all.

TCGAWorkflowData

 

   

Data for TCGA Workflow

Bioconductor version: Release (3.5)

This experimental data package contains 11 data sets necessary to follow the "TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages".

Author: Tiago Chedraoui Silva <tiagochst at usp.br>

Maintainer: Tiago Chedraoui Silva <tiagochst at usp.br>

Citation (from within R, enter citation("TCGAWorkflowData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("TCGAWorkflowData")

Documentation

HTML R Script 'Example data for TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages'
PDF   Reference Manual

Details

biocViews CancerData, ExperimentData, Homo_sapiens_Data, MicroarrayData
Version 1.0.0
License GPL-3
Depends R (>= 3.4.0)
Imports SummarizedExperiment
LinkingTo
Suggests knitr, rmarkdown, pander, testthat
SystemRequirements
Enhances
URL https://f1000research.com/articles/5-1542/v2
BugReports https://github.com/BioinformaticsFMRP/TCGAWorkflow/issues
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source TCGAWorkflowData_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/TCGAWorkflowData/
Package Downloads Report Download Stats

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