To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("HumanAffyData")

In most cases, you don't need to download the package archive at all.

HumanAffyData

DOI: 10.18129/B9.bioc.HumanAffyData    

GEO accession GSE64985 and ArrayExpress accession E-MTAB-62 as ExpressionSet objects

Bioconductor version: Release (3.6)

Re-analysis of human gene expression data generated on the Affymetrix HG_U133PlusV2 (EH176) and Affymetrix HG_U133A (EH177) platforms. The original data were normalized using robust multiarray averaging (RMA) to obtain an integrated gene expression atlas across diverse biological sample types and conditions. The entire compendia comprisee 9395 arrays for EH176 and 5372 arrays for EH177.

Author: Brad Nelms

Maintainer: Brad Nelms <bnelms.research at gmail.com>

Citation (from within R, enter citation("HumanAffyData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("HumanAffyData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HumanAffyData")

 

PDF R Script Intro to the HumanAffyData package
PDF   Reference Manual
Text   NEWS

Details

biocViews ArrayExpress, ExperimentData, ExpressionData, GEO, Homo_sapiens_Data, MicroarrayData
Version 1.4.0
License Artistic-2.0
Depends ExperimentHub, Biobase, R (>= 3.3)
Imports
LinkingTo
Suggests BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me CellMapper
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HumanAffyData_1.4.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/HumanAffyData
Package Short Url http://bioconductor.org/packages/HumanAffyData/
Package Downloads Report Download Stats

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