GGdata

DOI: 10.18129/B9.bioc.GGdata    

all 90 hapmap CEU samples, 47K expression, 4mm SNP

Bioconductor version: Release (3.7)

data exemplars dealing with hapmap SNP reports, GWAS, etc.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("GGdata")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("GGdata")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, Genome, HapMap, MicroarrayData, SNPData, SequencingData
Version 1.18.0
License LGPL
Depends R (>= 2.12.0), methods, Biobase(>= 2.5.5), GGBase, snpStats, illuminaHumanv1.db, AnnotationDbi
Imports
LinkingTo
Suggests
SystemRequirements
Enhances GGtools
URL
Depends On Me eQTL
Imports Me
Suggests Me crlmm, GGtools
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package GGdata_1.18.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/GGdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/GGdata
Package Short Url http://bioconductor.org/packages/GGdata/
Package Downloads Report Download Stats

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