To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("DmelSGI")

In most cases, you don't need to download the package archive at all.

DmelSGI

DOI: 10.18129/B9.bioc.DmelSGI    

Experimental data and documented source code for the paper "A Map of Directional Genetic Interactions in a Metazoan Cell"

Bioconductor version: Release (3.6)

The package contains the experimental data and documented source code of the manuscript "Fischer et al., A Map of Directional Genetic Interactions in a Metazoan Cell, eLife, 2015, in Press.". The vignette code generates all figures in the paper.

Author: Bernd Fischer

Maintainer: Bernd Fischer <b.fischer at dkfz.de>

Citation (from within R, enter citation("DmelSGI")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("DmelSGI")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DmelSGI")

 

PDF R Script DmelSGI
PDF   Reference Manual
Text   NEWS

Details

biocViews CellCulture, Drosophila_melanogaster_Data, ExperimentData, HighThroughputImagingData, HighthroughputImagingData, MicrotitrePlateAssayData, ReproducibleResearch
Version 1.10.0
License Artistic-2.0
Depends R (>= 3.0)
Imports grid, TSP, limma, rhdf5, knitr, abind, gplots, igraph
LinkingTo
Suggests BiocStyle, EBImage, RColorBrewer, RNAinteractMAPK, RSVGTipsDevice, cgdsr, hwriter, xtable, beeswarm
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package DmelSGI_1.10.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/DmelSGI
Package Short Url http://bioconductor.org/packages/DmelSGI/
Package Downloads Report Download Stats

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