To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("ChIPexoQualExample")

In most cases, you don't need to download the package archive at all.

ChIPexoQualExample

 

Example data for the ChIPexoQual package, which implements a quality control pipeline for ChIP-exo data

Bioconductor version: Release (3.5)

Data for the ChIPexoQual package, consisting of (3) chromosome 1 aligned reads from a ChIP-exo experiment for FoxA1 in mouse liver cell lines aligned to the mm9 genome.

Author: Rene Welch, Dongjun Chung, Sunduz Keles

Maintainer: Rene Welch <welch at stat.wisc.edu>

Citation (from within R, enter citation("ChIPexoQualExample")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("ChIPexoQualExample")

Documentation

HTML R Script Vignette Title
PDF   Reference Manual
Text   NEWS

Details

biocViews ExperimentData, Genome
Version 1.0.0
License GPL (>= 2)
Depends R (>= 3.3)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL http://www.github.com/keleslab/ChIPexoQualExample
Depends On Me
Imports Me
Suggests Me ChIPexoQual
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source ChIPexoQualExample_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/ChIPexoQualExample
Package Short Url http://bioconductor.org/packages/ChIPexoQualExample/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: