To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("greengenes13.5MgDb")

In most cases, you don't need to download the package archive at all.

greengenes13.5MgDb

 

   

Greengenes 13.5 16S rRNA Database Annotation Data

Bioconductor version: Release (3.5)

Metagenome annotation package with for the Greengenes 16S rRNA Database version 13.5. Contains a MgDb-class object, defined in the metagenomeFeatures package.

Author: Nathan D. Olson <nolson at umias.umd.edu>, Joseph Nathaniel Paulson, Hector Corrada-Bravo

Maintainer: Nathan D. Olson <nolson at umiacs.umd.edu>

Citation (from within R, enter citation("greengenes13.5MgDb")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("greengenes13.5MgDb")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData
Version 1.0.0
License Artistic-2.0
Depends R (>= 3.3.0), methods
Imports metagenomeFeatures
LinkingTo
Suggests
SystemRequirements
Enhances
URL https://github.com/HCBravoLab/greengenes13.5MgDb
BugReports https://github.com/HCBravoLab/greengenes13.5MgDb/issues
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/greengenes13.5MgDb/
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