To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("grasp2db")

In most cases, you don't need to download the package archive at all.

grasp2db

 

grasp2db, sqlite wrap of GRASP 2.0

Bioconductor version: Release (3.5)

grasp2db, sqlite wrap of NHLBI GRASP 2.0, an extended GWAS catalog.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("grasp2db")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("grasp2db")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("grasp2db")

 

PDF R Script grasp2db: interface to a high density GWAS catalogue
HTML R Script Notes on Bioconductor's GRASP2 database curation
PDF   Reference Manual
Text   README
Text   LICENSE

Details

biocViews AnnotationData
Version 1.0.0
License Artistic-2.0 + file LICENSE
Depends RSQLite, dplyr, dbplyr
Imports methods, utils, stats, GenomeInfoDb, AnnotationHub, digest
LinkingTo
Suggests gwascat, knitr
SystemRequirements
Enhances AnnotationHubData
URL
Depends On Me
Imports Me
Suggests Me AnnotationHubData

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source grasp2db_1.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/grasp2db/
Package Downloads Report Download Stats

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