To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("MafDb.ExAC.r0.3.1.snvs.hs37d5")

In most cases, you don't need to download the package archive at all.

MafDb.ExAC.r0.3.1.snvs.hs37d5

DOI: 10.18129/B9.bioc.MafDb.ExAC.r0.3.1.snvs.hs37d5    

Minor allele frequency data from ExAC for hs37d5

Bioconductor version: Release (3.5)

Store minor allele frequency data from the Exome Aggregation Consortium for single nucleotide variants in the human genome version hs37d5.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.ExAC.r0.3.1.snvs.hs37d5")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("MafDb.ExAC.r0.3.1.snvs.hs37d5")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, Homo_sapiens, MafDb
Version 3.5.0
License Artistic-2.0
Depends R (>= 3.0.0), VariantFiltering(>= 1.9.14)
Imports utils, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.ExAC.r0.3.1.snvs.hs37d5_3.5.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/MafDb.ExAC.r0.3.1.snvs.hs37d5/
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