prot2D

DOI: 10.18129/B9.bioc.prot2D    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

Statistical Tools for volume data from 2D Gel Electrophoresis

Bioconductor version: Release (3.8)

The purpose of this package is to analyze (i.e. Normalize and select significant spots) data issued from 2D GEl experiments

Author: Sebastien Artigaud

Maintainer: Sebastien Artigaud <sebastien.artigaud at gmx.com>

Citation (from within R, enter citation("prot2D")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("prot2D", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("prot2D")

 

PDF R Script prot2D
PDF   Reference Manual

Details

biocViews DifferentialExpression, MultipleComparison, Proteomics, Software
Version 1.20.0
In Bioconductor since BioC 2.13 (R-3.0) (5 years)
License GPL (>= 2)
Depends R (>= 2.15), fdrtool, st, samr, Biobase, limma, Mulcom, impute, MASS, qvalue
Imports
LinkingTo
Suggests made4, affy
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package prot2D_1.20.0.tar.gz
Windows Binary prot2D_1.20.0.zip
Mac OS X 10.11 (El Capitan) prot2D_1.20.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/prot2D
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/prot2D
Package Short Url http://bioconductor.org/packages/prot2D/
Package Downloads Report Download Stats

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