flowTrans

DOI: 10.18129/B9.bioc.flowTrans    

Parameter Optimization for Flow Cytometry Data Transformation

Bioconductor version: Release (3.8)

Profile maximum likelihood estimation of parameters for flow cytometry data transformations.

Author: Greg Finak <gfinak at fredhutch.org>, Juan Manuel-Perez <jperez at ircm.qc.ca>, Raphael Gottardo <rgottard at fredhutch.org>

Maintainer: Greg Finak <gfinak at fredhutch.org>

Citation (from within R, enter citation("flowTrans")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("flowTrans", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowTrans")

 

PDF R Script flowTrans package
PDF   Reference Manual

Details

biocViews FlowCytometry, Software
Version 1.34.0
In Bioconductor since BioC 2.6 (R-2.11) (8.5 years)
License Artistic-2.0
Depends R (>= 2.11.0), flowCore, flowViz, flowClust
Imports flowCore, methods, flowViz, stats, flowClust
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowTrans_1.34.0.tar.gz
Windows Binary flowTrans_1.34.0.zip
Mac OS X 10.11 (El Capitan) flowTrans_1.34.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowTrans
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowTrans
Package Short Url http://bioconductor.org/packages/flowTrans/
Package Downloads Report Download Stats

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