To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("caOmicsV")

In most cases, you don't need to download the package archive at all.

caOmicsV

 

   

Visualization of multi-dimentional cancer genomics data

Bioconductor version: Release (3.5)

caOmicsV package provides methods to visualize multi-dimentional cancer genomics data including of patient information, gene expressions, DNA methylations, DNA copy number variations, and SNP/mutations in matrix layout or network layout.

Author: Henry Zhang

Maintainer: Henry Zhang <hzhang at mail.nih.gov>

Citation (from within R, enter citation("caOmicsV")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("caOmicsV")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("caOmicsV")

 

PDF R Script Intrudoction_to_caOmicsV
PDF   Reference Manual
Text   NEWS

Details

biocViews Network, RNASeq, Software, Visualization
Version 1.6.0
In Bioconductor since BioC 3.2 (R-3.2) (1.5 years)
License GPL (>=2.0)
Depends R (>= 3.2), igraph (>= 0.7.1), bc3net (>= 1.0.2)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source caOmicsV_1.6.0.tar.gz
Windows Binary caOmicsV_1.6.0.zip
Mac OS X 10.11 (El Capitan) caOmicsV_1.6.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/caOmicsV/tree/release-3.5
Package Short Url http://bioconductor.org/packages/caOmicsV/
Package Downloads Report Download Stats

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