HELP

DOI: 10.18129/B9.bioc.HELP    

Tools for HELP data analysis

Bioconductor version: Release (3.8)

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications.

Author: Reid F. Thompson <reid.thompson at gmail.com>, John M. Greally <john.greally at einstein.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <reid.thompson at gmail.com>

Citation (from within R, enter citation("HELP")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("HELP", version = "3.8")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HELP")

 

PDF R Script 1. Primer
PDF   Reference Manual

Details

biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.40.0
In Bioconductor since BioC 2.3 (R-2.8) (10 years)
License GPL (>= 2)
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HELP_1.40.0.tar.gz
Windows Binary HELP_1.40.0.zip
Mac OS X 10.11 (El Capitan) HELP_1.40.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/HELP
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HELP
Package Short Url http://bioconductor.org/packages/HELP/
Package Downloads Report Download Stats

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