stjudem

DOI: 10.18129/B9.bioc.stjudem    

This is the development version of stjudem; for the stable release version, see stjudem.

Microarray Data from Yeoh et al. in MACAT format

Bioconductor version: Development (3.8)

This is a microarray data set on acute lymphoblastic leukemia, published in 2002 (Yeoh et al.Cancer Cell 2002). The experiments were conducted in the St.Jude Children's Research Hospital, Memphis, Tenessee, USA. The raw data was preprocessed by variance stabilizing normalization (Huber et al.) on probe and subsequent summarization of probe expression values into probe set expression values using median polish.

Author: Benjamin Georgi, Matthias Heinig, Sebastian Schmeier, Joern Toedling

Maintainer: Joern Toedling <toedling at ebi.ac.uk>

Citation (from within R, enter citation("stjudem")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("stjudem", version = "devel")

Documentation

PDF   Reference Manual

Details

biocViews CancerData, ChipOnChipData, ExperimentData, LeukemiaCancerData, MicroarrayData
Version 1.21.0
License LGPL (>= 2)
Depends R (>= 2.10), utils
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me macat
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package stjudem_1.21.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/stjudem
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/stjudem
Package Short Url http://bioconductor.org/packages/stjudem/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: