To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("scRNAseq")

In most cases, you don't need to download the package archive at all.

scRNAseq

 

   

This is the development version of scRNAseq; for the stable release version, see scRNAseq.

A Collection of Public Single-Cell RNA-Seq Datasets

Bioconductor version: Development (3.6)

Gene-level read counts of three public scRNA-seq datasets. See vignette for details.

Author: Davide Risso [aut, cre, cph], Michael Cole [aut]

Maintainer: Davide Risso <risso.davide at gmail.com>

Citation (from within R, enter citation("scRNAseq")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("scRNAseq")

Documentation

HTML R Script scRNAseq
PDF   Reference Manual

Details

biocViews ExperimentData, ExpressionData, RNASeqData, SequencingData
Version 1.3.0
License CC0
Depends R (>= 3.3), SummarizedExperiment
Imports
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me clusterExperiment, scone, zinbwave
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source scRNAseq_1.3.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Subversion source (username/password: readonly)
Package Short Url http://bioconductor.org/packages/scRNAseq/
Package Downloads Report Download Stats

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