To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("methyvimData")

In most cases, you don't need to download the package archive at all.

methyvimData

DOI: 10.18129/B9.bioc.methyvimData    

This is the development version of methyvimData; for the stable release version, see methyvimData.

Example experimental data for use with the methyvim package

Bioconductor version: Development (3.7)

Contains a reduced set of simulated data inspired by data produced by the Infinium EPIC BeadChip assays by Illumina. The example data set is made available to highlight many of the key procedures that are available within the core functions of the methyvim package.

Author: Nima Hejazi [aut, cre]

Maintainer: Nima Hejazi <nhejazi at berkeley.edu>

Citation (from within R, enter citation("methyvimData")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("methyvimData")

Documentation

HTML R Script Anatomy of the `methyvimData` package
PDF   Reference Manual
Text   LICENSE

Details

biocViews Clustering, DNAMethylation, DifferentialMethylation, ExperimentData, MethylSeq, MethylationArray
Version 1.1.0
License file LICENSE
Depends R (>= 3.4.0), minfi
Imports
LinkingTo
Suggests Biobase, BiocStyle, SummarizedExperiment, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me methyvim
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package methyvimData_1.1.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/methyvimData
Package Short Url http://bioconductor.org/packages/methyvimData/
Package Downloads Report Download Stats

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