genomationData

DOI: 10.18129/B9.bioc.genomationData    

This is the development version of genomationData; for the stable release version, see genomationData.

Experimental data for showing functionalities of the genomation package

Bioconductor version: Development (3.8)

The package contains Chip Seq, Methylation and Cage data, downloaded from Encode

Author: Altuna Akalin, Vedran Franke

Maintainer: Vedran Franke <vedran.franke at gmail.com>

Citation (from within R, enter citation("genomationData")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("genomationData", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genomationData")

 

PDF R Script genomationData
PDF   Reference Manual

Details

biocViews ChIPSeqData, ChipOnChipData, ENCODE, ExperimentData, Genome, SequencingData, StemCell
Version 1.13.0
License GPL-3
Depends
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me genomation
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package genomationData_1.13.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/genomationData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/genomationData
Package Short Url http://bioconductor.org/packages/genomationData/
Package Downloads Report Download Stats

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