diggitdata

DOI: 10.18129/B9.bioc.diggitdata    

This is the development version of diggitdata; for the stable release version, see diggitdata.

Example data for the diggit package

Bioconductor version: Development (3.9)

This package provides expression profile and CNV data for glioblastoma from TCGA, and transcriptional and post-translational regulatory networks assembled with the ARACNe and MINDy algorithms, respectively.

Author: Mariano Javier Alvarez

Maintainer: Mariano Javier Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("diggitdata")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("diggitdata", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("diggitdata")

 

PDF R Script Using bcellViper
PDF   Reference Manual
Text   NEWS

Details

biocViews Cancer, ExperimentData
Version 1.15.0
License GPL (>=2)
Depends R (>= 2.14.0), Biobase, methods
Imports viper
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me diggit
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package diggitdata_1.15.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/diggitdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/diggitdata
Package Short Url http://bioconductor.org/packages/diggitdata/
Package Downloads Report Download Stats

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