allenpvc

DOI: 10.18129/B9.bioc.allenpvc    

This is the development version of allenpvc; to use it, please install the devel version of Bioconductor.

GEO accession data GSE71585 as a SingleCellExperiment

Bioconductor version: Development (3.8)

Celular taxonomy of the primary visual cortex in adult mice based on single cell RNA-sequencing from a study performed by the Allen Institute for Brain Science. In said study 49 transcriptomic cell types are identified.

Author: Diogo P. P. Branco

Maintainer: Diogo P. P. Branco <diogo.pp.branco at gmail.com>

Citation (from within R, enter citation("allenpvc")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly=TRUE))
    install.packages("BiocManager")
BiocManager::install("allenpvc", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("allenpvc")

 

HTML R Script Vignette Title
PDF   Reference Manual

Details

biocViews ExperimentData, ExpressionData, RNASeqData, SingleCellData
Version 0.99.1
License CC0
Depends R (>= 3.5.0), AnnotationHub, ExperimentHub(>= 1.7.0), SingleCellExperiment
Imports
LinkingTo
Suggests BiocStyle, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package allenpvc_0.99.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/allenpvc
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/allenpvc
Package Short Url http://bioconductor.org/packages/allenpvc/
Package Downloads Report Download Stats

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