To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("TimerQuant")

In most cases, you don't need to download the package archive at all.

TimerQuant

DOI: 10.18129/B9.bioc.TimerQuant    

This is the development version of TimerQuant; for the stable release version, see TimerQuant.

Timer Quantification

Bioconductor version: Development (3.6)

Supplementary Data package for tandem timer methods paper by Barry et al. (2015) including TimerQuant shiny applications.

Author: Joseph Barry

Maintainer: Joseph Barry <joseph.barry at embl.de>

Citation (from within R, enter citation("TimerQuant")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("TimerQuant")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TimerQuant")

 

PDF R Script Supplementary Methods - automatic generation of paper figures
PDF R Script Supplementary Methods - mathematical derivations
PDF   Reference Manual

Details

biocViews Danio_rerio_Data, ExperimentData, HighThroughputImagingData, Tissue
Version 1.7.0
License Artistic-2.0
Depends shiny
Imports ggplot2, grid, gridExtra, deSolve, dplyr, locfit
LinkingTo
Suggests BiocStyle, reshape2, knitr, shinyBS
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TimerQuant_1.7.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/TimerQuant
Package Short Url http://bioconductor.org/packages/TimerQuant/
Package Downloads Report Download Stats

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