DOI: 10.18129/B9.bioc.RNAinteractMAPK    

This is the development version of RNAinteractMAPK; for the stable release version, see RNAinteractMAPK.

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Bioconductor version: Development (3.8)

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <b.fischer at dkfz.de>

Maintainer: Bernd Fischer <b.fischer at dkfz.de>

Citation (from within R, enter citation("RNAinteractMAPK")):


To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly=TRUE))
BiocManager::install("RNAinteractMAPK", version = "devel")


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script RNAinteractMAPK
PDF   Reference Manual


biocViews CellCulture, Drosophila_melanogaster_Data, ExperimentData, MicrotitrePlateAssayData
Version 1.19.0
License Artistic-2.0
Depends R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Imports grid, gdata, MASS, genefilter
Suggests qvalue, lattice
Depends On Me
Imports Me
Suggests Me DmelSGI
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package RNAinteractMAPK_1.19.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/RNAinteractMAPK
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RNAinteractMAPK
Package Short Url http://bioconductor.org/packages/RNAinteractMAPK/
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