HDCytoData

DOI: 10.18129/B9.bioc.HDCytoData    

This is the development version of HDCytoData; for the stable release version, see HDCytoData.

Data package of high-dimensional cytometry data sets in SummarizedExperiment and flowSet formats

Bioconductor version: Development (3.8)

Data package containing a set of high-dimensional cytometry data sets saved in SummarizedExperiment and flowSet Bioconductor object formats, including row and column meta-data describing samples, cell populations (clusters), and protein markers.

Author: Lukas M. Weber [aut, cre], Charlotte Soneson [aut]

Maintainer: Lukas M. Weber <lukmweber at gmail.com>

Citation (from within R, enter citation("HDCytoData")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("HDCytoData", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HDCytoData")

 

HTML R Script HDCytoData data package
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews ExperimentData, ExpressionData, FlowCytometryData, Homo_sapiens_Data, Proteome
Version 1.1.2
License MIT + file LICENSE
Depends ExperimentHub, SummarizedExperiment, flowCore
Imports utils, methods
LinkingTo
Suggests BiocStyle, knitr, rmarkdown, FlowSOM, Rtsne, ggplot2
SystemRequirements
Enhances
URL https://github.com/lmweber/HDCytoData
BugReports https://github.com/lmweber/HDCytoData/issues
Depends On Me
Imports Me
Suggests Me diffcyt
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HDCytoData_1.1.2.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/HDCytoData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HDCytoData
Package Short Url http://bioconductor.org/packages/HDCytoData/
Package Downloads Report Download Stats

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