greengenes13.5MgDb

DOI: 10.18129/B9.bioc.greengenes13.5MgDb    

This is the development version of greengenes13.5MgDb; for the stable release version, see greengenes13.5MgDb.

Greengenes 13.5 16S rRNA Database Annotation Data

Bioconductor version: Development (3.8)

Metagenome annotation package with for the Greengenes 16S rRNA Database version 13.5. Contains a MgDb-class object, defined in the metagenomeFeatures package.

Author: Nathan D. Olson <nolson at umias.umd.edu>, Joseph Nathaniel Paulson, Hector Corrada-Bravo

Maintainer: Nathan D. Olson <nolson at umiacs.umd.edu>

Citation (from within R, enter citation("greengenes13.5MgDb")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("greengenes13.5MgDb", version = "devel")

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData, Microbiome
Version 2.0.0
License Artistic-2.0
Depends R (>= 3.4.0), methods
Imports metagenomeFeatures(>= 1.9.9)
LinkingTo
Suggests
SystemRequirements
Enhances
URL https://github.com/HCBravoLab/greengenes13.5MgDb
BugReports https://github.com/HCBravoLab/greengenes13.5MgDb/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package greengenes13.5MgDb_2.0.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/greengenes13.5MgDb/
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