MafDb.TOPMed.freeze5.hg38

DOI: 10.18129/B9.bioc.MafDb.TOPMed.freeze5.hg38    

This is the development version of MafDb.TOPMed.freeze5.hg38; for the stable release version, see MafDb.TOPMed.freeze5.hg38.

Minor allele frequency data from TOPMed for hg38

Bioconductor version: Development (3.9)

Store minor allele frequency data from NHLBI TOPMed for the human genome version hg38.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.TOPMed.freeze5.hg38")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("MafDb.TOPMed.freeze5.hg38", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.7.1
License Artistic-2.0
Depends R (>= 3.0.0), GenomicScores(>= 1.3.19)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
LinkingTo
Suggests SNPlocs.Hsapiens.dbSNP149.GRCh38
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.TOPMed.freeze5.hg38_3.7.1.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/MafDb.TOPMed.freeze5.hg38/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: