To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("MafDb.1Kgenomes.phase1.hs37d5")

In most cases, you don't need to download the package archive at all.

MafDb.1Kgenomes.phase1.hs37d5

DOI: 10.18129/B9.bioc.MafDb.1Kgenomes.phase1.hs37d5    

This is the development version of MafDb.1Kgenomes.phase1.hs37d5; for the stable release version, see MafDb.1Kgenomes.phase1.hs37d5.

Minor allele frequency data from 1000 Genomes Phase 1 for hs37d5

Bioconductor version: Development (3.7)

Store minor allele frequency data from the Phase 1 of the 1000 Genomes Project for the human genome version hs37d5.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.1Kgenomes.phase1.hs37d5")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("MafDb.1Kgenomes.phase1.hs37d5")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.6.0
License Artistic-2.0
Depends R (>= 3.0.0), GenomicScores(>= 1.0.0)
Imports utils, S4Vectors, IRanges, GenomicRanges, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me GenomicScores, VariantFiltering

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.1Kgenomes.phase1.hs37d5_3.6.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url http://bioconductor.org/packages/MafDb.1Kgenomes.phase1.hs37d5/
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