ssviz

DOI: 10.18129/B9.bioc.ssviz    

This is the development version of ssviz; for the stable release version, see ssviz.

A small RNA-seq visualizer and analysis toolkit

Bioconductor version: Development (3.9)

Small RNA sequencing viewer

Author: Diana Low

Maintainer: Diana Low <lowdiana at gmail.com>

Citation (from within R, enter citation("ssviz")):

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("ssviz", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ssviz")

 

PDF R Script ssviz
PDF   Reference Manual
Text   NEWS

Details

biocViews Genetics, MultipleComparison, RNASeq, Sequencing, Software, Visualization
Version 1.17.0
In Bioconductor since BioC 3.0 (R-3.1) (4 years)
License GPL-2
Depends R (>= 2.15.1), methods, Rsamtools, Biostrings, reshape, ggplot2, RColorBrewer, stats
Imports
LinkingTo
Suggests knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ssviz_1.17.0.tar.gz
Windows Binary ssviz_1.17.0.zip
Mac OS X 10.11 (El Capitan) ssviz_1.17.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/ssviz
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ssviz
Package Short Url http://bioconductor.org/packages/ssviz/
Package Downloads Report Download Stats

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