sscore

DOI: 10.18129/B9.bioc.sscore    

This is the development version of sscore; for the stable release version, see sscore.

S-Score Algorithm for Affymetrix Oligonucleotide Microarrays

Bioconductor version: Development (3.9)

This package contains an implementation of the S-Score algorithm as described by Zhang et al (2002).

Author: Richard Kennedy <rkennedy at ms.soph.uab.edu>, based on C++ code from Li Zhang <zhangli at odin.mdacc.tmc.edu> and Borland Delphi code from Robnet Kerns <rtkerns at vcu.edu>.

Maintainer: Richard Kennedy <rkennedy at ms.soph.uab.edu>

Citation (from within R, enter citation("sscore")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("sscore", version = "3.9")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sscore")

 

PDF R Script SScore primer
PDF   Reference Manual

Details

biocViews DifferentialExpression, Software
Version 1.55.0
In Bioconductor since BioC 1.8 (R-2.3) (12.5 years)
License GPL (>= 2)
Depends R (>= 1.8.0), affy, affyio
Imports
LinkingTo
Suggests affydata
SystemRequirements
Enhances
URL http://home.att.net/~richard-kennedy/professional.html
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package sscore_1.55.0.tar.gz
Windows Binary sscore_1.55.0.zip
Mac OS X 10.11 (El Capitan) sscore_1.55.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/sscore
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sscore
Package Short Url http://bioconductor.org/packages/sscore/
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