To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("diggit")

In most cases, you don't need to download the package archive at all.

diggit

DOI: 10.18129/B9.bioc.diggit    

This is the development version of diggit; for the stable release version, see diggit.

Inference of Genetic Variants Driving Cellular Phenotypes

Bioconductor version: Development (3.6)

Inference of Genetic Variants Driving Cellullar Phenotypes by the DIGGIT algorithm

Author: Mariano J Alvarez <reef103 at gmail.com>

Maintainer: Mariano J Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("diggit")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("diggit")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("diggit")

 

PDF R Script Using DIGGIT
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews FunctionalPrediction, GeneExpression, GeneRegulation, NetworkEnrichment, Software, SystemsBiology
Version 1.9.0
In Bioconductor since BioC 3.1 (R-3.2) (2.5 years)
License file LICENSE
Depends R (>= 3.0.2), Biobase, methods
Imports ks, viper(>= 1.3.1), parallel
LinkingTo
Suggests diggitdata
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package diggit_1.9.0.tar.gz
Windows Binary diggit_1.9.0.zip
Mac OS X 10.11 (El Capitan) diggit_1.9.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/diggit
Package Short Url http://bioconductor.org/packages/diggit/
Package Downloads Report Download Stats

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