consensus

DOI: 10.18129/B9.bioc.consensus    

This is the development version of consensus; for the stable release version, see consensus.

Cross-platform consensus analysis of genomic measurements via interlaboratory testing method

Bioconductor version: Development (3.9)

An implementation of the American Society for Testing and Materials (ASTM) Standard E691 for interlaboratory testing procedures, designed for cross-platform genomic measurements. Given three (3) or more genomic platforms or laboratory protocols, this package provides interlaboratory testing procedures giving per-locus comparisons for sensitivity and precision between platforms.

Author: Tim Peters

Maintainer: Tim Peters <t.peters at garvan.org.au>

Citation (from within R, enter citation("consensus")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("consensus", version = "3.9")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("consensus")

 

PDF R Script Fitting and visualising row-linear models with \texttt{consensus}
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews DataRepresentation, GeneExpression, Microarray, QualityControl, RNASeq, Regression, Software
Version 1.1.0
License BSD_3_clause + file LICENSE
Depends R (>= 3.5), RColorBrewer
Imports matrixStats, gplots, grDevices, methods, graphics, stats, utils
LinkingTo
Suggests knitr, RUnit, rmarkdown, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package consensus_1.1.0.tar.gz
Windows Binary consensus_1.1.0.zip
Mac OS X 10.11 (El Capitan) consensus_1.1.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/consensus
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/consensus
Package Short Url http://bioconductor.org/packages/consensus/
Package Downloads Report Download Stats

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