clusterStab

DOI: 10.18129/B9.bioc.clusterStab    

This is the development version of clusterStab; for the stable release version, see clusterStab.

Compute cluster stability scores for microarray data

Bioconductor version: Development (3.8)

This package can be used to estimate the number of clusters in a set of microarray data, as well as test the stability of these clusters.

Author: James W. MacDonald, Debashis Ghosh, Mark Smolkin

Maintainer: James W. MacDonald <jmacdon at u.washington.edu>

Citation (from within R, enter citation("clusterStab")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("clusterStab", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("clusterStab")

 

PDF R Script clusterStab Overview
PDF   Reference Manual

Details

biocViews Clustering, Software
Version 1.53.0
In Bioconductor since BioC 1.7 (R-2.2) (13 years)
License Artistic-2.0
Depends Biobase(>= 1.4.22), R (>= 1.9.0), methods
Imports
LinkingTo
Suggests fibroEset, genefilter
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package clusterStab_1.53.0.tar.gz
Windows Binary clusterStab_1.53.0.zip
Mac OS X 10.11 (El Capitan) clusterStab_1.53.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/clusterStab
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/clusterStab
Package Short Url http://bioconductor.org/packages/clusterStab/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: