To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("bigmelon")

In most cases, you don't need to download the package archive at all.

bigmelon

 

This is the development version of bigmelon; for the stable release version, see bigmelon.

Illumina methylation array analysis for large experiments

Bioconductor version: Development (3.6)

Methods for working with Illumina arrays using gdsfmt.

Author: Tyler J. Gorrie-Stone [cre, aut], Ayden Saffari [aut], Karim Malki [aut], Leonard C. Schalkwyk [aut]

Maintainer: Tyler J. Gorrie-Stone <tgorri at essex.ac.uk>

Citation (from within R, enter citation("bigmelon")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("bigmelon")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("bigmelon")

 

PDF R Script The \Rpackage{bigmelon} Package
PDF   Reference Manual
Text   NEWS

Details

biocViews CpGIsland, DNAMethylation, DataImport, MethylationArray, Microarray, Preprocessing, QualityControl, Software, TwoChannel
Version 1.3.0
In Bioconductor since BioC 3.4 (R-3.3) (1 year)
License GPL-3
Depends R (>= 3.3), wateRmelon(>= 1.19.1), gdsfmt(>= 1.0.4), methods, methylumi, minfi(>= 1.21.0), Biobase
Imports stats, utils, GEOquery, graphics
LinkingTo
Suggests BiocGenerics, BiocStyle, minfiData, parallel
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source bigmelon_1.3.0.tar.gz
Windows Binary bigmelon_1.3.0.zip
Mac OS X 10.11 (El Capitan) bigmelon_1.3.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/bigmelon
Package Short Url http://bioconductor.org/packages/bigmelon/
Package Downloads Report Download Stats

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