To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("affyio")

In most cases, you don't need to download the package archive at all.

affyio

DOI: 10.18129/B9.bioc.affyio    

This is the development version of affyio; for the stable release version, see affyio.

Tools for parsing Affymetrix data files

Bioconductor version: Development (3.7)

Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.

Author: Ben Bolstad <bmb at bmbolstad.com>

Maintainer: Ben Bolstad <bmb at bmbolstad.com>

Citation (from within R, enter citation("affyio")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("affyio")

Documentation

PDF   Reference Manual

Details

biocViews DataImport, Infrastructure, Microarray, Software
Version 1.49.1
In Bioconductor since BioC 1.8 (R-2.3) (11.5 years)
License LGPL (>= 2)
Depends R (>= 2.6.0)
Imports zlibbioc, methods
LinkingTo
Suggests
SystemRequirements
Enhances
URL https://github.com/bmbolstad/affyio
Depends On Me affyPara, makecdfenv, SCAN.UPC, sscore
Imports Me affy, affylmGUI, crlmm, ExiMiR, gcrma, oligo, oligoClasses, puma
Suggests Me BufferedMatrixMethods
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package affyio_1.49.1.tar.gz
Windows Binary affyio_1.49.1.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) affyio_1.49.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/affyio
Package Short Url http://bioconductor.org/packages/affyio/
Package Downloads Report Download Stats

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