DOI: 10.18129/B9.bioc.affyQCReport    

This is the development version of affyQCReport; for the stable release version, see affyQCReport.

QC Report Generation for affyBatch objects

Bioconductor version: Development (3.7)

This package creates a QC report for an AffyBatch object. The report is intended to allow the user to quickly assess the quality of a set of arrays in an AffyBatch object.

Author: Craig Parman <craig.parman at>, Conrad Halling <conrad.halling at>, Robert Gentleman

Maintainer: Craig Parman <craig.parman at>

Citation (from within R, enter citation("affyQCReport")):


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PDF R Script affyQCReport: Methods for Generating Affymetrix QC Reports
PDF   Reference Manual


biocViews Microarray, OneChannel, QualityControl, Software
Version 1.57.0
In Bioconductor since BioC 1.7 (R-2.2) (12.5 years)
License LGPL (>= 2)
Depends Biobase(>= 1.13.16), affy, lattice
Imports affy, affyPLM, Biobase, genefilter, graphics, grDevices, lattice, RColorBrewer, simpleaffy, stats, utils, xtable
Suggests tkWidgets(>= 1.5.23), affydata(>= 1.4.1)
Depends On Me
Imports Me
Suggests Me BiocCaseStudies
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