TnT

DOI: 10.18129/B9.bioc.TnT    

This is the development version of TnT; for the stable release version, see TnT.

Interactive Visualization for Genomic Features

Bioconductor version: Development (3.9)

A R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.

Author: Jialin Ma [cre, aut], Miguel Pignatelli [aut], Toby Hocking [aut]

Maintainer: Jialin Ma <marlin- at gmx.cn>

Citation (from within R, enter citation("TnT")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("TnT", version = "3.9")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("TnT")

 

HTML R Script Introduction to TnT
PDF   Reference Manual
Text   NEWS

Details

biocViews Infrastructure, Software, Visualization
Version 1.5.0
License AGPL-3
Depends R (>= 3.4), GenomicRanges
Imports methods, stats, utils, grDevices, htmlwidgets, jsonlite, data.table, Biobase, GenomeInfoDb, IRanges, S4Vectors, knitr
LinkingTo
Suggests GenomicFeatures, shiny, BiocManager, rmarkdown, testthat
SystemRequirements
Enhances
URL https://github.com/Marlin-Na/TnT
BugReports https://github.com/Marlin-Na/TnT/issues
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package TnT_1.5.0.tar.gz
Windows Binary TnT_1.5.0.zip
Mac OS X 10.11 (El Capitan) TnT_1.5.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/TnT
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/TnT
Package Short Url http://bioconductor.org/packages/TnT/
Package Downloads Report Download Stats

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