SPEM

DOI: 10.18129/B9.bioc.SPEM    

This is the development version of SPEM; for the stable release version, see SPEM.

S-system parameter estimation method

Bioconductor version: Development (3.9)

This package can optimize the parameter in S-system models given time series data

Author: Xinyi YANG Developer, Jennifer E. DENT Developer and Christine NARDINI Supervisor

Maintainer: Xinyi YANG <yangxinyi at picb.ac.cn>

Citation (from within R, enter citation("SPEM")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("SPEM", version = "3.9")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SPEM")

 

PDF R Script Vignette for SPEM
PDF   Reference Manual
Text   NEWS

Details

biocViews Network, NetworkInference, Software
Version 1.23.0
In Bioconductor since BioC 2.12 (R-3.0) (5.5 years)
License GPL-2
Depends R (>= 2.15.1), Rsolnp, Biobase, methods
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me TMixClust
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SPEM_1.23.0.tar.gz
Windows Binary SPEM_1.23.0.zip
Mac OS X 10.11 (El Capitan) SPEM_1.23.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/SPEM
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/SPEM
Package Short Url http://bioconductor.org/packages/SPEM/
Package Downloads Report Download Stats

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