REBET

DOI: 10.18129/B9.bioc.REBET    

This is the development version of REBET; for the stable release version, see REBET.

The subREgion-based BurdEn Test (REBET)

Bioconductor version: Development (3.9)

There is an increasing focus to investigate the association between rare variants and diseases. The REBET package implements the subREgion-based BurdEn Test which is a powerful burden test that simultaneously identifies susceptibility loci and sub-regions.

Author: Bill Wheeler [cre], Bin Zhu [aut], Lisa Mirabello [ctb], Nilanjan Chatterjee [ctb]

Maintainer: Bill Wheeler <wheelerb at imsweb.com>

Citation (from within R, enter citation("REBET")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("REBET", version = "3.9")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("REBET")

 

PDF R Script REBET Vignette
PDF   Reference Manual
Text   NEWS

Details

biocViews SNP, Software, VariantAnnotation
Version 1.1.0
License GPL-2
Depends ASSET
Imports stats, utils
LinkingTo
Suggests RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package REBET_1.1.0.tar.gz
Windows Binary REBET_1.1.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan) REBET_1.1.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/REBET
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/REBET
Package Short Url http://bioconductor.org/packages/REBET/
Package Downloads Report Download Stats

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