RCyjs

DOI: 10.18129/B9.bioc.RCyjs    

This is the development version of RCyjs; for the stable release version, see RCyjs.

Display and manipulate graphs in cytoscape.js

Bioconductor version: Development (3.7)

Interactive viewing and exploration of graphs, connecting R to Cytoscape.js, using websockets.

Author: Paul Shannon

Maintainer: Paul Shannon <paul.thurmond.shannon at gmail.com>

Citation (from within R, enter citation("RCyjs")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("RCyjs")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RCyjs")

 

PDF R Script RCyjs
PDF   Reference Manual
Text   README
Text   NEWS
Text   LICENSE

Details

biocViews GraphAndNetwork, Software, ThirdPartyClient, Visualization
Version 2.1.25
In Bioconductor since BioC 3.1 (R-3.2) (3 years)
License MIT + file LICENSE
Depends R (>= 3.4.2), BrowserViz(>= 2.0.0), graph(>= 1.56.0)
Imports methods, httpuv (>= 1.3.5), BiocGenerics, base64enc, utils
LinkingTo
Suggests RUnit, BiocStyle, RefNet
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RCyjs_2.1.25.tar.gz
Windows Binary RCyjs_2.1.25.zip
Mac OS X 10.11 (El Capitan) RCyjs_2.1.25.tgz
Source Repository git clone https://git.bioconductor.org/packages/RCyjs
Package Short Url http://bioconductor.org/packages/RCyjs/
Package Downloads Report Download Stats

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