To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("DiffLogo")

In most cases, you don't need to download the package archive at all.

DiffLogo

 

   

This is the development version of DiffLogo; for the stable release version, see DiffLogo.

DiffLogo: A comparative visualisation of sequence motifs

Bioconductor version: Development (3.6)

DiffLogo is an easy-to-use tool to visualize motif differences.

Author: Martin Nettling [aut], Hendrik Treutler [aut, cre], Jan Grau [aut, ctb], Jens Keilwagen [aut, ctb], Stefan Posch [aut], Ivo Grosse [aut]

Maintainer: Hendrik Treutler <htreutle at ipb-halle.de>

Citation (from within R, enter citation("DiffLogo")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("http://bioc.ism.ac.jp/biocLite.R")
biocLite("DiffLogo")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DiffLogo")

 

PDF R Script Basics of the DiffLogo package
PDF   Reference Manual

Details

biocViews MotifAnnotation, MultipleComparison, SequenceMatching, Software, Visualization
Version 1.7.0
In Bioconductor since BioC 3.2 (R-3.2) (1.5 years)
License GPL (>= 2)
Depends R (>= 1.8.0), stats, cba
Imports
LinkingTo
Suggests knitr, testthat, seqLogo, MotifDb
SystemRequirements
Enhances
URL https://github.com/mgledi/DiffLogo/
BugReports https://github.com/mgledi/DiffLogo/issues
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source DiffLogo_1.7.0.tar.gz
Windows Binary DiffLogo_1.7.0.zip
Mac OS X 10.11 (El Capitan) DiffLogo_1.7.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/DiffLogo
Package Short Url http://bioconductor.org/packages/DiffLogo/
Package Downloads Report Download Stats

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