Cormotif

DOI: 10.18129/B9.bioc.Cormotif    

This is the development version of Cormotif; for the stable release version, see Cormotif.

Correlation Motif Fit

Bioconductor version: Development (3.8)

It fits correlation motif model to multiple studies to detect study specific differential expression patterns.

Author: Hongkai Ji, Yingying Wei

Maintainer: Yingying Wei <ywei at jhsph.edu>

Citation (from within R, enter citation("Cormotif")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Cormotif", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Cormotif")

 

PDF R Script Cormotif Vignette
PDF   Reference Manual

Details

biocViews DifferentialExpression, Microarray, Software
Version 1.27.0
In Bioconductor since BioC 2.9 (R-2.14) (7 years)
License GPL-2
Depends R (>= 2.12.0), affy, limma
Imports affy, graphics, grDevices
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Enhances
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Imports Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Cormotif_1.27.0.tar.gz
Windows Binary Cormotif_1.27.0.zip
Mac OS X 10.11 (El Capitan) Cormotif_1.27.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Cormotif
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Cormotif
Package Short Url http://bioconductor.org/packages/Cormotif/
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