DOI: 10.18129/B9.bioc.CALIB    

This is the development version of CALIB; for the stable release version, see CALIB.

Calibration model for estimating absolute expression levels from microarray data

Bioconductor version: Development (3.9)

This package contains functions for normalizing spotted microarray data, based on a physically motivated calibration model. The model parameters and error distributions are estimated from external control spikes.

Author: Hui Zhao, Kristof Engelen, Bart De Moor and Kathleen Marchal

Maintainer: Hui Zhao <hui.zhao at>

Citation (from within R, enter citation("CALIB")):


To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
BiocManager::install("CALIB", version = "3.9")

For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:



PDF R Script CALIB Overview
PDF   Reference Manual


biocViews Microarray, Preprocessing, Software, TwoChannel
Version 1.49.0
In Bioconductor since BioC 2.0 (R-2.5) (11.5 years)
License LGPL
Depends R (>= 2.10), limma, methods
Imports limma, methods, graphics, stats, utils
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

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Follow Installation instructions to use this package in your R session.

Source Package CALIB_1.49.0.tar.gz
Windows Binary (32- & 64-bit)
Mac OS X 10.11 (El Capitan) CALIB_1.49.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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