BiocFileCache

DOI: 10.18129/B9.bioc.BiocFileCache    

This is the development version of BiocFileCache; for the stable release version, see BiocFileCache.

Manage Files Across Sessions

Bioconductor version: Development (3.8)

This package creates a persistent on-disk cache of files that the user can add, update, and retrieve. It is useful for managing resources (such as custom Txdb objects) that are costly or difficult to create, web resources, and data files used across sessions.

Author: Lori Shepherd [aut, cre], Martin Morgan [aut]

Maintainer: Lori Shepherd <lori.shepherd at roswellpark.org>

Citation (from within R, enter citation("BiocFileCache")):

Installation

To install this package, start R and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("BiocFileCache", version = "devel")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BiocFileCache")

 

HTML R Script BiocFileCache: Managing File Resources Across Sessions
PDF   Reference Manual
Text   NEWS

Details

biocViews DataImport, Software
Version 1.5.7
In Bioconductor since BioC 3.5 (R-3.4) (1.5 years)
License Artistic-2.0
Depends R (>= 3.4.0), dbplyr (>= 1.0.0)
Imports methods, stats, utils, dplyr, RSQLite, DBI, rappdirs, httr
LinkingTo
Suggests testthat, knitr, BiocStyle, rmarkdown, rtracklayer
SystemRequirements
Enhances
URL
BugReports https://github.com/Bioconductor/BiocFileCache/issues
Depends On Me simpleSingleCell
Imports Me cbaf, CTDquerier, EnrichmentBrowser, GSEABenchmarkeR, IMMAN, Organism.dplyr, tximeta, UniProt.ws
Suggests Me BiocOncoTK, progeny, seqsetvis, TENxBrainData, TENxPBMCData
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BiocFileCache_1.5.7.tar.gz
Windows Binary BiocFileCache_1.5.7.zip
Mac OS X 10.11 (El Capitan) BiocFileCache_1.5.7.tgz
Source Repository git clone https://git.bioconductor.org/packages/BiocFileCache
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/BiocFileCache
Package Short Url http://bioconductor.org/packages/BiocFileCache/
Package Downloads Report Download Stats

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